Great for: Building knowledge AND reading skills for kids in K-2. I think this is a very worthy sacrifice for readability and knowledge-building. Important to note: The books are about 80-85% decodable and occasionally include words that are not yet decodable for the reader. I couldn’t love this line from their brochure more: “Learning to read while reading to learn.”Īlso, Geodes “are built on best practices of traditional decodables but without sacrificing highly engaging stories and deep rewarding knowledge of history, science and the arts.” The books have decodable text, fantastic illustrations or photographs, AND huge opportunities for building vocabulary, comprehension, and general knowledge. It’s rare that you find decodable books that actually impart knowledge, but Geodes has mastered this. I could hardly wait to read them when I opened the box. Geodes are truly lovely, incredible books. The PAF record also has a method blast_identity which calculates the blast identity for that record.I am still a big fan of Flyleaf, but when I received a sample of Geodes, Flyfleaf lost its place as our most beautiful decodables. When print or str are called on PAF record (named tuple) a formated PAF string is returned, which is useful for writing records to a file. The SAM-like tags are converted into their specified types and stored in a dictionary with the tag name as the key and the value a named tuple with fields name, type, and value. If used as an iterator, then each object returned is a named tuple representing a single line in the PAF file.Įach named tuple has field names as specified by the fields parameter. dataframe: bool, if True, return a pandas.DataFrame with the tags expanded into separate Series.This should ideally be 0 to match minimap2's output default: 0 na_rep: Value to use when a NaN value specified in na_values is found.This is only applied to numeric fields, default: na_values: A list of values to interpret as NaN.
These are based on the PAF specification. "residue_matches", "alignment_block_length", "mapping_quality", "tags" "target_name", "target_length", "target_start", "target_end",
"query_name", "query_length", "query_start", "query_end", "strand",
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